I salute your 15-year-old for his/her interest in ancient history. I'm a history fanatic. I visited Rome in 1994 and again in 2022.
One idea is to visit the Jewish Ghetto of Rome. The main synagogue has an A-level museum, the temple itself features a superb design and there are multiple ancient Roman ruins in the neighborhood. The Jewish neighborhood hosts a part of the Teatro Marcello, which was the model for the actual Colosseum. I found the Teatro Marcello more interesting than the Colosseum. Go here: https://anamericaninrome.com/2017/04/teatro-marcello-rome/
Ostia Antica, the ancient port of Rome, is worth visiting. I saw it on my 2022 trip: https://www.ostia-antica.org/
The Appian Way (https://www.ostrichtrails.com/europe/italy/appian-way-walk/) is an excellent walk or bicycle ride. The Ancient Romans built the road, and it's still there. It's like walking through history with the monuments, ancient structures and aqueducts. I walked the Appian to Aqueduct Park (https://www.romesightseeing.net/aqueduct-park/). If you bicycle the Appian, be extra careful: I saw a woman who had tumbled from her bicycle. You would be bicycling over 2,000-year-old pavement.
The Christian Catacombs are definitely worth visiting (and they're near the Appian Way): https://www.catacombesancallisto.it/en/index.php
The Vatican Museum and Sistine Chapel (and St. Peter's Basilica) are excellent sites.
If you really want to geek out on history -- I certainly did -- you could visit Pompeii and come back in a day. I did that in 2022. However, if you went there and back to Rome in a single day, you'd probably miss the Naples Archeological Museum, which holds the artifacts from Pompeii. Also, Naples is a pretty cool city. (Keep in mind that Pompeii is about 20 miles outside of Naples, but you can get to Pompeii via a bus or transit or splurge on an Uber.)
Yet one more idea: You could tour some of the breathtaking churches in Rome's center. Some I saw: The Basilica di Santa Maria Maggiore, San Giovanni in Laterano (the first Vatican), Santa Maria in Trastevere, Santa Prassede & San Zeno Chapel (probably the most amazing of the churches and some tourists miss Prassede) and San Clemente.