Look at this excellent map - http://www.orangesmile.com/destinations/img/athens-map-big.jpg -  (click & it gets huuuge, use side sliders to put Acropolis in center)...  Actually all your sites are shown there, tho without a "key"
• Dionysus & Herodius Atticus theatres are #12 & #73 on S. Side of Acropolis...  temple of Themis is really just a foundation,  in between the 2 theatres
• Aeropagus Hill (also called "mars Hill" by Romans) is just outside the main exit of the Acropolis, before  you enter the Ancient forum (its #17 on the map) --  A huge shiny ROCK, fun to climb if  you have rubber soles; be careful not to slide down on your behind!!
• For Philapappos Hill, walk  WEST of Acropolis along the delightful pedestrianized promenade called Dionysu AreoSomthing ....  & turn S & up the hill.   BTW, there have been some isolated reports of muggings here, for people going up that path alone... lots of shrubbery etc; best to do it in company.
• A better choice  in my opnion is the PNYX... which is on the same promenade, but a bit further along  = #17 on map for some reason spelled as PNIKA...  an easy slope up to a flat area, with a Famous  Platform; https://en.wikipedia.org/wiki/Pnyx -- this was where the Ancient  democratic assemblies would meet. and on the platform y ou can stand where Pericles, Aristides and Demosthenes & other famous orators spoke.  To me, much more of a thrill  than Philapappos, named for a roman ruler after the Golden Age of Greece was past.   PLUS -- Pynx is a GREAT perspective for photos of the Parthenon -- google "image" to see.