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Flights between Athens and Santorini

When we leave Santorini we are flying back to Athens with an arrival time of 9:20am. Our next flight leaves Athens at 12:30pm. It is an entirely different booking. Any experience with flights from Santorini? Delayed often? How about the time it takes to get bags, recheck and go through security in Athens?

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Unless something unforseen happens island flights are normally prompt and seldom delayed for any significant length of time. ATH is well-designed and not to large. 3 hours is way more than enough time to take care of business before you depart at 12:30pm.