Best Plan for Paris on a Tuesday

Honestly, if you have just arrived from a trans atlantic flight, I would not do the Eiffel Tower on the first day. You will be tired and it can take a long time to get to the top of the tower, and then you have to stand in another long line to come down. Maybe switch and do the Arc de Triomphe and Champs Elysees the first afternoon, and do the Eifel Tower on Thursday. Otherwise, I think your itinerary looks good.

The Rodin is worth considering as it is more compact and has an outdoor portion. I would give up time from the Champs Élysées to see it if you were open to that.

The Museum Pass will not get you into the Louvre without a reservation so be sure to book a time slot well in advance -- it has been selling out lately. I think with the Orsay you just walk in with it without a reservation BUT you may stand in a long line on Tuesday -- so early is good. And presumably you know that the Museum Pass won't get you up the Eiffel Tower which should be reserved at 1 pm French time 7 days out. I don't see how a Museum Pass is a useful choice with this itinerary -- just order timed tickets for your selections.

You may consider skipping Versailles especially if you’re interested in visiting the other museums; Orangerie, Rodin, Cluny, and the Army Museum.

If you’re planning to go up the Eiffel Tower, you may book your tickets as soon as 60 days in advance at the official website here: www.toureiffel.paris
Enjoy your time in beautiful PAris!

Edit: I'm eating my hat. I went up this evening and loved it. Timed tickets, almost no wait at 8 pm, elevator wasn't bad, recognized so many buildings. So it is very nice if you can make it work. This wasn't my first time up, but the descriptions of waiting and crowds that I read here we're discouraging. Glad it wasn't like that.

Life can continue quite well and happily just looking at the Eiffel Tower without spending all the time going up it. You will have just arrived, will have to wait in a line even with timed tickets, go up in a sardine can elevator, are unlikely to recognize much from the view. Spend the time taking the boat ride on the Seine, go up to the top of Montmartre and look out at that view. It's free and less crowded. (I'm taking a grandchild up next week and am not looking forward to it. Grandpa got the Tix and now can't do it.)
Other panoramas:
Pompidou Center top floor escalator
Roof cafe in the Galeries Lafayette département store
Montmartre
Montparnasse Tower

How athletic are you? My son and grandchild are doing a Fat Tire bicycle tour of Paris on a Tuesday.

I think the museum pass only allows one entry per site, so if you want to return to the Orsay, you'll have to buy a ticket.